Romain Koszul Research Group
Softwares and Protocols
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Spatial reorganization of telomeres in yeast quiescence long-lived cells (Guidi et al., Genome Biology, in press; with Angela Taddei lab)
Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging (Marbouty, le Gall et al., Molecular Cell, 2015; with Marcelo Nollmann lab)
meta3C is an integrated approach to metagenomic analysis, allowing the
assembly, scaffolding and 3D characterization of unknown genomes from complex mix of species (Marbouty
, eLife, 2014)
GRAAL is a powerful scaffolding program that exploits chromosome contacts data and polymer physics predictions to compute the most likely structure of a genome (Marie-Nelly
, Nature Commun., 2014)
As members of the international consortium Saccharomyces cerevisiae 2.0 led by Pr. Jef Boeke (NYU), we contributed to the analysis of the first synthetic eukaryotic chromosome (Annaluru
, Science, 2014).
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