2015
2014
Marbouty, Marie-Nelly, Cournac, Flot, Mozziconacci, Koszul*
"meta3C unveils the diversity of chromosome organization in microorganisms"
eLife, 2014
Marie-Nelly*, Marbouty, Cournac, Flot, Liti, Pande-Parodi, Syan, Guillen, Margeot, Zimmer*, Koszul*
"High-resolution genome (re)assembly using chromosome contact information"
Nature Communications, 2014
Marie-Nelly, Marbouty, Cournac, Liti, Fischer, Zimmer, Koszul*
“Identifying functional elements in yeasts using genomewide contact maps"
Bioinformatics, 2014
Hespeels, Knapen, Laurent, Hanot-Mambres, Heuskin, Koszul* and Van Doninck*
“Gateway to genetic exchange? DNA double strand breaks in the asexual bdelloid rotifer Adineta vaga submitted to desiccation”
Journal of Evolutionary Biology, 2014
Annaluru*, Muller*, Mitchell, Ramalingam, Stracquadanio, Richardson, Dymond, Scheifele, Cooper, Cai, Zeller, Agmon, Hadjithomas, Tullman, Caravelli, Cirelli, Guo, London, Yeluru, Murugan, Kandavelou, Yang, Martin, … Koszul, Bader, Boeke and Chandrasegaran
“Total Synthesis of a Functional Designer Eukaryotic Chromosome."
Science, Mar 2014
Marbouty, Ermont, Dujon, Richard, Koszul*
"Purification of G1 daughter cells from different Saccharomycetes species through an optimized centrifugal elutriation procedure."
Yeast, Mar 2014, doi: 10.1002/yea.3005.
"meta3C unveils the diversity of chromosome organization in microorganisms"
eLife, 2014
Marie-Nelly*, Marbouty, Cournac, Flot, Liti, Pande-Parodi, Syan, Guillen, Margeot, Zimmer*, Koszul*
"High-resolution genome (re)assembly using chromosome contact information"
Nature Communications, 2014
Marie-Nelly, Marbouty, Cournac, Liti, Fischer, Zimmer, Koszul*
“Identifying functional elements in yeasts using genomewide contact maps"
Bioinformatics, 2014
Hespeels, Knapen, Laurent, Hanot-Mambres, Heuskin, Koszul* and Van Doninck*
“Gateway to genetic exchange? DNA double strand breaks in the asexual bdelloid rotifer Adineta vaga submitted to desiccation”
Journal of Evolutionary Biology, 2014
Annaluru*, Muller*, Mitchell, Ramalingam, Stracquadanio, Richardson, Dymond, Scheifele, Cooper, Cai, Zeller, Agmon, Hadjithomas, Tullman, Caravelli, Cirelli, Guo, London, Yeluru, Murugan, Kandavelou, Yang, Martin, … Koszul, Bader, Boeke and Chandrasegaran
“Total Synthesis of a Functional Designer Eukaryotic Chromosome."
Science, Mar 2014
Marbouty, Ermont, Dujon, Richard, Koszul*
"Purification of G1 daughter cells from different Saccharomycetes species through an optimized centrifugal elutriation procedure."
Yeast, Mar 2014, doi: 10.1002/yea.3005.
2013
Flot, Hespeels, Li, Noel, Arkhipova, Danchin, Hejnol, Henrissat, Koszul, Aury, Barbe, Bast, Bazykin, Chabrol, Couloux, Da Rocha, Da Silva, Gladyshev, Gouret, Hecox-Lea, Labadie,Lejeune, Piskurek, Poulain, Rodriguez, Ryan, Vakhrusheva, Wirth, Yushenova, Kellis, Kondrashov, Mark Welch, Pontarotti, Weissenbach, Wincker, Jaillon, Van Doninck
Life after sex : the ameiotic genome of the bdelloid rotifer Adenita vaga.
Nature, 500(7463), 2013
Life after sex : the ameiotic genome of the bdelloid rotifer Adenita vaga.
Nature, 500(7463), 2013
2012
Cournac, Marie-Nelly, Marbouty, Koszul*, Mozziconacci*
Normalization of a chromosomal contact map.
BMC Genomics, 13:436, 2012
Wong, Marie-Nelly, Herbert, Carrivain, Blanc, Koszul, Fabre, Zimmer
A predictive computational model of the dynamic 3D interphase yeast nucleus.
Current Biology, 2012
Koszul*, Meselson, Van Doninck, Vandenhaute, Zickler*
Centenary of the Chiasmatype theory.
Genetics, 191(2), 2012
Translation of seminal paper by F. A. Janssens, by Koszul and Zickler
The chiasmatype theory. A new interpretation of the maturation divisions.
Genetics, 191(2), 319 - 346, 2012
Normalization of a chromosomal contact map.
BMC Genomics, 13:436, 2012
Wong, Marie-Nelly, Herbert, Carrivain, Blanc, Koszul, Fabre, Zimmer
A predictive computational model of the dynamic 3D interphase yeast nucleus.
Current Biology, 2012
Koszul*, Meselson, Van Doninck, Vandenhaute, Zickler*
Centenary of the Chiasmatype theory.
Genetics, 191(2), 2012
Translation of seminal paper by F. A. Janssens, by Koszul and Zickler
The chiasmatype theory. A new interpretation of the maturation divisions.
Genetics, 191(2), 319 - 346, 2012
Past Work
Koszul, Kleckner
Dynamic chromosome movements during meiosis: a way to eliminate unwanted connections?
Trends Cell Biol. 19(12):716-24, 2009
Koszul*, Fischer*
A prominent role for segmental duplications in reshaping eukaryotic genomes
C R Biol . 332(2-3):254-66, 2009
Koszul, Kim, Prentiss, Kleckner*, Kameoka
Meiotic chromosomes move by linkage to dynamic actin cables with transduction of force through the nuclear envelope.
Cell 133(7):1188-201, 2008
Koszul, Kameoka, Weiner
Real-time imaging of meiotic chromosomes in S. cerevisiae.
Methods in Molecular Biology, 558, 2009
Wanat**, Kim**, Koszul**, Weiner, Kleckner, Alani
Telomere Csm4, in collaboration with Ndj1, mediates telomere-led chromosome dynamics and recombination during yeast meiosis.
PLoS Genet., 4(9) 2008
Payen**, Koszul**, Dujon, Fischer
Segmental Duplications Arise from Pol32-dependent Repair of Broken Forks Through Two Alternative Replication-based Mechanisms.
PLoS Genet., 4(9) 2008
Koszul, Dujon and Fischer
Stability of Large Segmental Duplications in the Yeast Genome.
Genetics, 172 2006
Boyer, Badis, Fairhead, Talla, Hantraye, Fabre, Fischer, Hennequin, Koszul, Lafontaine, Ozier-Kalogeropoulos, Ricchetti, Richard, Thierry, Dujon.
Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae.
Genome Biol., 5(9) 2004
Dujon, Sherman, Fischer, Durrens, Casaregola, Lafontaine, De Montigny, Marck, Neuvéglise, Talla, Goffard, Frangeul, Aigle, Anthouard, Babour, Barbe, Barnay, Blanchin, Beckerich, Beyne, Bleykasten, Boisramé, Boyer, Cattolico, Confanioleri, De Daruvar, Despons, Fabre, Fairhead, Ferry-Dumazet, Groppi, Hantraye, Hennequin, Jauniaux, Joyet, Kachouri, Kerrest, Koszul, Lemaire, Lesur, Ma, Muller, Nicaud, Nikolski, Oztas, Ozier-Kalogeropoulos, Pellenz, Potier, Richard, Straub, Suleau, Swennen, Tekaia, Wésolowski-Louvel, Westhof, Wirth, Zeniou-Meyer, Zivanovic, Bolotin-Fukuhara, Thierry, Bouchier, Caudron, Scarpelli, Gaillardin, Weissenbach, Wincker, Souciet
Genome evolution in yeasts.
Nature, 430(6995), 2004.
Koszul, Caburet, Dujon and Fischer
Eukaryotic Genome Evolution through the Spontaneous Duplication of Large Chromosomal Segments.
EMBO Journal, 23(1) 2004
Koszul**, Malpertuy**, Frangeul, Bouchier, Wincker, Thierry, Duthoy, Ferris, Hennequin and Dujon
The Complete Mitochondrial Genome Sequence of the Pathogenic Yeast Candida (Torulopsis) glabrata.
FEBS Letters, 534, 2003
Dynamic chromosome movements during meiosis: a way to eliminate unwanted connections?
Trends Cell Biol. 19(12):716-24, 2009
Koszul*, Fischer*
A prominent role for segmental duplications in reshaping eukaryotic genomes
C R Biol . 332(2-3):254-66, 2009
Koszul, Kim, Prentiss, Kleckner*, Kameoka
Meiotic chromosomes move by linkage to dynamic actin cables with transduction of force through the nuclear envelope.
Cell 133(7):1188-201, 2008
Koszul, Kameoka, Weiner
Real-time imaging of meiotic chromosomes in S. cerevisiae.
Methods in Molecular Biology, 558, 2009
Wanat**, Kim**, Koszul**, Weiner, Kleckner, Alani
Telomere Csm4, in collaboration with Ndj1, mediates telomere-led chromosome dynamics and recombination during yeast meiosis.
PLoS Genet., 4(9) 2008
Payen**, Koszul**, Dujon, Fischer
Segmental Duplications Arise from Pol32-dependent Repair of Broken Forks Through Two Alternative Replication-based Mechanisms.
PLoS Genet., 4(9) 2008
Koszul, Dujon and Fischer
Stability of Large Segmental Duplications in the Yeast Genome.
Genetics, 172 2006
Boyer, Badis, Fairhead, Talla, Hantraye, Fabre, Fischer, Hennequin, Koszul, Lafontaine, Ozier-Kalogeropoulos, Ricchetti, Richard, Thierry, Dujon.
Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae.
Genome Biol., 5(9) 2004
Dujon, Sherman, Fischer, Durrens, Casaregola, Lafontaine, De Montigny, Marck, Neuvéglise, Talla, Goffard, Frangeul, Aigle, Anthouard, Babour, Barbe, Barnay, Blanchin, Beckerich, Beyne, Bleykasten, Boisramé, Boyer, Cattolico, Confanioleri, De Daruvar, Despons, Fabre, Fairhead, Ferry-Dumazet, Groppi, Hantraye, Hennequin, Jauniaux, Joyet, Kachouri, Kerrest, Koszul, Lemaire, Lesur, Ma, Muller, Nicaud, Nikolski, Oztas, Ozier-Kalogeropoulos, Pellenz, Potier, Richard, Straub, Suleau, Swennen, Tekaia, Wésolowski-Louvel, Westhof, Wirth, Zeniou-Meyer, Zivanovic, Bolotin-Fukuhara, Thierry, Bouchier, Caudron, Scarpelli, Gaillardin, Weissenbach, Wincker, Souciet
Genome evolution in yeasts.
Nature, 430(6995), 2004.
Koszul, Caburet, Dujon and Fischer
Eukaryotic Genome Evolution through the Spontaneous Duplication of Large Chromosomal Segments.
EMBO Journal, 23(1) 2004
Koszul**, Malpertuy**, Frangeul, Bouchier, Wincker, Thierry, Duthoy, Ferris, Hennequin and Dujon
The Complete Mitochondrial Genome Sequence of the Pathogenic Yeast Candida (Torulopsis) glabrata.
FEBS Letters, 534, 2003